Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857885.1_cds_XP_016513602.1_26127
CDS Infomation

[gene=LOC107830523] [db_xref=GeneID:107830523] [protein=inactive glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic-like isoform X2] [protein_id=XP_016513602.1] [location=complement(join(50442..50558,50723..50830,51045..51143,51272..51383,51489..51592,51725..51892,52013..52264,52546..52836,53363..53521))] [gbkey=CDS]
Sequence

ATGTCTCTTCCTACTTGGCTGAATCTCAAGATTAATGCCCCTCATTTTGTTTACAAGCCT
ACATCAAAGCTCATTCCAGCTTCTGTTCCATCAAAGTTGAATCTATCATATACACAACAT
TTTGAATGTCCAAACTCTCTAATTCCTCCAGCAGACCAGAATGTTGCAGCAATTGTGTTT
GGAGATGGATCAAATTCAAGACTTTATCCATTGACAAAGAGAAGGTCAGAGTCTGCACTT
CCTATCGCAGGGAACTACAGACTCATTGATGCAGTTGTTAGTAACTGCATCAATAGTAAT
ATAAGGAAGGTATATGCACTTACACAGTTTAACTCTGCCTCTCTAAATTCCCACCTTTCA
AGAGCTTATTCTAGTGCACGAATCGGGAACGAAGCATTAGTTGAAGTCATTGCAGCTTAT
CAGAGCCCTGAGGGCAAAGGATGGTTTCAGGGAACTGCTGATGCTATAAGAAGATGTTTG
TGGGTACTAGAAGAGTACCCGATCCTCGAGTTTCTACTGCTTCCCGGTTACCATCTTTAC
AAAATGGATTTCCAGGAACTCTTAGAGGCTCACTGGAACAACAGAGCTGATATAACTGTT
GCAGTGTTAAGTCGAACGAGGGATAACGATACAGAATTTGGTACTTTCCAACTAAATTCT
GAAAATCAAGTCATTGCTTTCAAAGACAATCCAGAGAAGCGAGTACAAAATTCAGAGAAA
TTGAAAGACATTTCTCATGATAATTTTGCCAGCATGGATATCTATGTTGTTAATAAAGAT
GCTATGATAAAGCTTCTGACAGAGTATCATCCTTTGGCCAATGACTTCAGAAGAGAAGTT
GTACCAGGTGCAATTTCCTTAGGAATGAATGTATATGCACACAAATTCAGCGGCTACTGG
GACGATATCAGAAGCATTGAAGCTTACTACCGGGCAAATATGGAAAGCATAAAGAATACA
AATAAGGCATATTGCATGTATGACAAAGACTCTCCGCTATACACTTTGCCTCGACACCTA
CCTCCAACTCAGATAACTGATGCTGTTATAACGGACTCTGTGATCGGAGATGGATGCTTT
CTCAATAGATGCAAGATCAGAGGTACAGTTGTTGGCATGAGAACAAGAGTAGGTGATGGA
GCAACTGTTGAGGATTCAGTAATAATGGGTTCCGATACCTATCAAGGCGGTCGCTTAGAG
GAGGATATCCACATTCCTATTGGAATTGGAGAAGGCACGCAAATAAGGAAAGCAATAATT
GATAAGAATGTGAGAATTGGCAAAAATGTTAAGATTTTGAATAGGGAAAATGTCCAAGAG
TGTAGTAATGAAGAAAATGGCTACATTATCACTGGAGGCATAGTTGTAATTTTGAAGGGT
GCCATTATTCCAAATGGAAGCATTATATGA

Peptide Sequence

PEP ID

XP_016513602.1
PEP Infomation

PREDICTED: inactive glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MSLPTWLNLKINAPHFVYKPTSKLIPASVPSKLNLSYTQHFECPNSLIPPADQNVAAIVF
GDGSNSRLYPLTKRRSESALPIAGNYRLIDAVVSNCINSNIRKVYALTQFNSASLNSHLS
RAYSSARIGNEALVEVIAAYQSPEGKGWFQGTADAIRRCLWVLEEYPILEFLLLPGYHLY
KMDFQELLEAHWNNRADITVAVLSRTRDNDTEFGTFQLNSENQVIAFKDNPEKRVQNSEK
LKDISHDNFASMDIYVVNKDAMIKLLTEYHPLANDFRREVVPGAISLGMNVYAHKFSGYW
DDIRSIEAYYRANMESIKNTNKAYCMYDKDSPLYTLPRHLPPTQITDAVITDSVIGDGCF
LNRCKIRGTVVGMRTRVGDGATVEDSVIMGSDTYQGGRLEEDIHIPIGIGEGTQIRKAII
DKNVRIGKNVKILNRENVQECSNEENGYIITGGIVVILKGAIIPNGSII

Transcript Sequence

Gene sequence data has not been registered.